- Added on December 15 2023
- https://chat.openai.com/g/g-RJbylO276-pltgpt
How to use PLTGPT?
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Step 1 ： Click the open gpts about PLTGPT button above, or the link below.
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Step 2 ： Follow some prompt about PLTGPT words that pop up, and then operate.
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Step 3 ： You can feed some about PLTGPT data to better serve your project.
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Step 4 ： Finally retrieve similar questions and answers based on the provided content.
FAQ from PLTGPT?
PLTGPT is a tool that helps analyze protein-ligand interactions through graph theory-based metrics. The tool calculates the pairwise residue-residue contact map, distance matrix, and shortest path matrix for the protein-ligand complex. It can also generate visual representations of the complex and provide valuable insights into the binding mechanism.
PLTGPT is equipped with a user-friendly interface that provides interactive visualization of protein-ligand complexes. The tool supports multiple input file formats, and it is customizable in terms of the selection of residues and ligand. Additionally, it calculates various graph theory-based metrics that can be used to analyze the binding affinity of protein-ligand complexes.
PLTGPT can be used to analyze protein-ligand complexes and provide useful insights into drug discovery. The tool can be used to identify key residues that are important for the binding of ligands and can also help researchers understand the nature of the interactions between the protein and ligand. Furthermore, the tool can be used to optimize the binding affinity of ligands and thus aid in the development of novel drugs.